Just in case anyone's searching for issues like this; I've had similar problems with my Nov 2004 [MY2005] 3.0TDI for almost all the time I've had the car [5 years].
The battery is the original Nov 2004 Varta which seems OK for most of the time.
Occasionally I get DIS 'Battery Management' alerts and more often, the 'Battery Level' display is at 10% or 60%. [Funnily, it never seems to be anything than this, other than 100%, obviously]! But the car has never failed to start, although the car has occasionally turned off a lot of the electrical 'stuff'. However, it's happened half a dozen times over Xmas so I've had enough. I've been back to my friendly [Non Audi] service agents and they've found there is a Battery Energy Management [bEM] ECU Firmware upgrade for my car.
Note: this is not an MMI Upgrade - mine's been at 5570 for some time. This is an ECU firmware upgrade that apparently has to be installed directly by a VAS using an Audi firmware CD.
The fix covers various issues including "10% Battery Level on the MMI display". The A8 version upgrades the ECU code to 0510, in my case to replace the 0390 version that I presume has been on the car since new. CD 'part' number for A8s is 4E0 906 961G [yes, it's very similar, but not the same as 'MMI upgrade' CD numbers]. There's a separate CD part number for the same issue on A6s to take them up to 0490, but Hey, this is an A8 forum
My upgrade's due for later in the week; will add to this later once I've seen the results.
Julian
BTW, forgot to say the battery was tested and is apprently still within spec.